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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr1:23321644 | missense_variant | 27 | A/T | Gcc/Acc | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 23318572 | 23333576 |
Silent | chr1:23318579 | missense_variant | 102 | A/V | gCc/gTc | Consequential_in_ncORF_only | Overlapping | 1 | 23318572 | 23333576 |
Missense | chr1:23321557 | missense_variant | 56 | T/A | Aca/Gca | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 23318572 | 23333576 |
Silent | chr1:23318573 | stop_lost | 104 | */S | tGa/tCa | Consequential_in_ncORF_only | Overlapping | 1 | 23318572 | 23333576 |
Intron | chr1:23011192 | missense_variant | 15 | R/I | aGa/aTa | Consequential_in_ncORF_only | Not_overlapping | 1 | 23011146 | 23013917 |
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