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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Intron | chr1:962148 | stop_gained | 25 | Q/* | Caa/Taa | Consequential_in_ncORF_only | Not_overlapping | 1 | 960694 | 962225 |
Intron | chr1:962196 | frameshift_variant | 41 | P/X | Ccc/cc | Consequential_in_ncORF_only | Not_overlapping | 1 | 960694 | 962225 |
Missense | chr1:964445 | missense_variant | 60 | R/Q | cGa/cAa | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 963988 | 964974 |
Silent | chr1:964004 | missense_variant | 6 | R/H | cGc/cAc | Consequential_in_ncORF_only | Overlapping | 1 | 963988 | 964974 |
Silent | chr1:964429 | missense_variant | 55 | R/C | Cgt/Tgt | Consequential_in_ncORF_only | Overlapping | 1 | 963988 | 964974 |
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