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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr19:49951947 | missense_variant | 39 | S/L | tCg/tTg | Consequential_in_both_canonical_and_ncORF | Overlapping | 19 | 49951928 | 49958372 |
Silent | chr19:49894463 | missense_variant | 46 | S/Y | tCc/tAc | Consequential_in_ncORF_only | Overlapping | 19 | 49894429 | 49895942 |
Splice | chr19:49888426 | missense_variant | 76 | A/T | Gct/Act | Consequential_in_ncORF_only | Not_overlapping | 19 | 49887554 | 49888713 |
Silent | chr19:49888615 | stop_gained | 139 | R/* | Cga/Tga | Consequential_in_ncORF_only | Overlapping | 19 | 49887554 | 49888713 |
Silent | chr19:49888480 | stop_gained | 94 | Q/* | Cag/Tag | Consequential_in_ncORF_only | Overlapping | 19 | 49887554 | 49888713 |
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