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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Silent | chr19:12893490 | missense_variant | 31 | A/V | gCt/gTt | Consequential_in_ncORF_only | Overlapping | 19 | 12891891 | 12893572 |
Missense | chr19:12893483 | missense_variant | 29 | D/Y | Gat/Tat | Consequential_in_both_canonical_and_ncORF | Overlapping | 19 | 12891891 | 12893572 |
Missense | chr19:12891936 | missense_variant | 16 | D/H | Gac/Cac | Consequential_in_both_canonical_and_ncORF | Overlapping | 19 | 12891891 | 12892419 |
Splice | chr19:12858745 | stop_gained | 5 | W/* | tgG/tgA | Consequential_in_ncORF_only | Not_overlapping | 19 | 12858731 | 12858832 |
Intron | chr19:12774536 | frameshift_variant | 31 | S/X | Tca/ca | Consequential_in_ncORF_only | Not_overlapping | 19 | 12774378 | 12774626 |
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