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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr13:60485842 | missense_variant | 11 | E/K | Gaa/Aaa | Consequential_in_both_canonical_and_ncORF | Overlapping | 13 | 60485812 | 60494486 |
Silent | chr13:60483825 | missense_variant | 40 | R/H | cGc/cAc | Consequential_in_ncORF_only | Overlapping | 13 | 60467312 | 60485827 |
Missense | chr13:60485819 | missense_variant | 76 | S/C | Agt/Tgt | Consequential_in_both_canonical_and_ncORF | Overlapping | 13 | 60467312 | 60485827 |
RNA | chr12:111900229 | stop_lost | 32 | */R | Tga/Cga | Consequential_in_ncORF_only | Not_overlapping | 12 | 111900136 | 111900231 |
RNA | chr12:111900530 | missense_variant | 57 | L/S | tTa/tCa | Consequential_in_ncORF_only | Not_overlapping | 12 | 111900361 | 111900663 |
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