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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr8|16143557|16155144|-|3|circRNA|MSR1|ENST00000350896.3|8,7,6
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
chr8|17064083|17085318|+|5|circRNA|MICU3|NM_181723|2,3,4,5,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr8|17064083|17105584|+|10|circRNA|MICU3|NM_181723|2,3,4,5,6,7,8,9,10,11
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr8|17234715|17237373|-|2|circRNA|CNOT7|ENST00000361272.8|5,4
Not cell-type specific
N/A
Not differentially expressed
SW620
Not differentially expressed
Not cell-type specific
chr8|11852609|11853479|-|2|circRNA|CTSB|ENST00000353047.10|3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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