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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

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*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chrX|84468471|84475397|-|2|circRNA|HDX|ENST00000297977.9|3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chrX|84802184|84802887|+|1|circRNA|Unknown|T376962|2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chrX|85303405|85308216|-|6|circRNA|POF1B|NM_024921|15,14,13,12,11,10
Not cell-type specific
N/A
Not differentially expressed
HT29,LoVo,SW480
Not differentially expressed
Not cell-type specific
chrX|85345859|85367766|-|4|circRNA|POF1B|NM_024921|6,5,4,3
Not cell-type specific
N/A
Not differentially expressed
HT29,LoVo,SW480
Not differentially expressed
Not cell-type specific
chrX|8585266|8587978|-|2|circRNA|ANOS1|ENST00000262648.7|6,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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