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CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

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*Click CircRNA to view comprehensive information in new page.

​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
chr9|37424844|37426654|+|3|circRNA|GRHPR|ENST00000493368.5|2,3,4
Not cell-type specific
CRAMS303
Downregulated in MvN
HCT116,LoVo,SW480,SW620
chr9|4286037|4286523|-|1|circRNA|GLIS3|NM_001042413|2
Not cell-type specific
CRAMS14
Downregulated in MvN,Downregulated in MvP
HCT116,HT29,LoVo
chr9|5968018|5988545|-|2|circRNA|KIAA2026|ENST00000399933.7|3,2
Not cell-type specific
CRAMS246
Downregulated in MvN
HCT116,HT29,LoVo,SW480,SW620
chr9|74996446|75017448|-|5|circRNA|C9orf41|ENST00000376834.7|6,5,4,3,2
Not cell-type specific
CRAMS42
Downregulated in MvN,Downregulated in MvP
HCT116,HT29,LoVo,SW480,SW620
chr9|96551795|96565483|-|4|circRNA|CDC14B|ENST00000474602.5|5,4,3,2
Not cell-type specific
CRAMS135
Downregulated in MvN
HCT116,HT29,SW480
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