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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr1|227016079|227017050|-|2|circRNA|CDC42BPA|ENST00000366767.7|32,31 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|227016079|227035607|-|10|circRNA|CDC42BPA|ENST00000366767.7|32,31,30,29,28,27,26,25,24,23 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr1|227026054|227035607|-|7|circRNA|CDC42BPA|ENST00000366767.7|29,28,27,26,25,24,23 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo | Not differentially expressed | Not cell-type specific |
chr1|227028656|227035607|-|6|circRNA|CDC42BPA|ENST00000366767.7|28,27,26,25,24,23 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr1|227030407|227035607|-|5|circRNA|CDC42BPA|ENST00000366767.7|27,26,25,24,23 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
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