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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr1|23854359|23863271|-|3|circRNA|FUCA1|ENST00000374479.3|5,4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr1|239492708|239545749|+|2|circRNA|CHRM3|ENST00000468573.5|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr1|239492708|239678288|+|4|circRNA|CHRM3|ENST00000468573.5|2,3,4,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr1|241506002|241508785|-|2|circRNA|FH|NM_000143|6,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr1|241566490|241586736|+|3|circRNA|KMO|ENST00000366558.7|9,10,11
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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