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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr1|39368147|39372596|+|3|circRNA|MACF1|ENST00000567887.5|50,51,52 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
chr1|39385433|39388658|+|2|circRNA|MACF1|ENST00000567887.5|57,58 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr1|39432654|39433047|+|1|ciRNA|MACF1|ENST00000567887.5|67 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|39447431|39448763|+|4|circRNA|MACF1|ENST00000567887.5|81,82,83,84 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|39459832|39459975|+|1|ciRNA|MACF1|ENST00000360115.8|5 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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