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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr1|77813733|77815231|+|2|circRNA|FAM73A|ENST00000370791.7|6,7 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|77858937|77861322|+|4|circRNA|FAM73A|ENST00000370791.7|9,10,11,12 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|77858937|77864028|+|5|circRNA|FAM73A|ENST00000370791.7|9,10,11,12,13 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr1|77916054|77918273|+|3|circRNA|NEXN|ENST00000401035.7|2,3,4 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr1|77949154|77962930|-|6|circRNA|FUBP1|ENST00000294623.8|19,18,17,16,15,14 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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