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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr10|103097290|103098984|-|2|circRNA|NT5C2|ENST00000404739.7|9,8 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr10|103111744|103174982|-|3|circRNA|NT5C2|ENST00000461461.5|4,3,2 | Not cell-type specific | N/A | Not differentially expressed | HT29,SW620 | Not differentially expressed | Not cell-type specific |
chr10|103139405|103181328|-|3|circRNA|NT5C2|NM_012229|4,3,2 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr10|103326533|103333952|-|2|circRNA|PCGF6|ENST00000337211.8|5,4 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr10|103347237|103348999|-|4|circRNA|PCGF6|ENST00000369847.3|5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
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