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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr10|127339005|127362212|+|4|circRNA|DOCK1|ENST00000280333.9|30,31,32,33
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|127339005|127384909|+|9|circRNA|DOCK1|ENST00000280333.9|30,31,32,33,34,35,36,37,38
Not cell-type specific
N/A
Not differentially expressed
SW480
Not differentially expressed
Not cell-type specific
chr10|12791157|12816328|+|3|circRNA|CAMK1D|ENST00000619168.4|6,7,8
Not cell-type specific
N/A
Not differentially expressed
HT29
Not differentially expressed
Not cell-type specific
chr10|129806916|129813788|+|2|circRNA|Unknown|T050910|6,7
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|13127744|13133581|+|3|circRNA|OPTN|ENST00000263036.9|12,13,14
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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