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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr10|30908932|30984426|-|3|circRNA|ZNF438|NM_001143769|4,3,2
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
chr10|3118781|3120044|+|2|circRNA|PFKP|ENST00000381125.8|15,16
Not cell-type specific
N/A
Not differentially expressed
LoVo,SW480
Not differentially expressed
Not cell-type specific
chr10|31355143|31387266|+|3|circRNA|ZEB1|ENST00000493835.5|1,2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|31355143|31387798|+|4|circRNA|ZEB1|ENST00000493835.5|1,2,3,4
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|31373017|31387266|+|3|circRNA|ZEB1|ENST00000488625.6|3,4,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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