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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr10|52271349|52290290|+|7|circRNA|PRKG1|NM_001098512|11,12,13,14,15,16,17
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|5648969|5653050|-|3|circRNA|ASB13|NM_024701|4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|5709529|5712539|+|2|circRNA|FAM208B|ENST00000532424.5|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|5709529|5712918|+|2|circRNA|FAM208B|ENST00000473789.5|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|28119650|28131691|-|6|circRNA|MPP7|ENST00000337532.9|12,11,10,9,8,7
Not cell-type specific
N/A
Not differentially expressed
HCT116,SW480,SW620
Not differentially expressed
Not cell-type specific
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