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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr10|74070669|74074903|+|4|circRNA|VCL|ENST00000624354.3|2,3,4,5 | Not cell-type specific | N/A | Not differentially expressed | HCT116,SW620 | Not differentially expressed | Not cell-type specific |
chr10|74174415|74200838|+|2|circRNA|ADK|ENST00000478611.2|2,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr10|74314666|74398579|+|3|circRNA|ADK|ENST00000539909.5|4,5,6 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo | Not differentially expressed | Not cell-type specific |
chr10|74394140|74398579|+|2|circRNA|ADK|ENST00000539909.5|5,6 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr10|74589281|74600493|+|2|circRNA|ADK|ENST00000539909.5|7,8 | Myeloid Cells | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not supported |
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