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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr10|94497054|94500327|+|2|circRNA|TBC1D12|NM_015188|5,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|94510090|94522453|+|4|circRNA|TBC1D12|NM_015188|8,9,10,11
Not cell-type specific
N/A
Not differentially expressed
SW620
Not differentially expressed
Not cell-type specific
chr10|9456421|9458961|-|2|circRNA|Unknown|T036997|4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr10|94720395|94733438|+|3|circRNA|CYP2C18|NM_000772|6,7,8
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
chr10|94724345|94781997|+|6|circRNA|RP11-400G3.5|ENST00000464755.1|5,6,7,8,9,10
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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