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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr11|47628952|47631087|-|3|circRNA|MTCH2|NM_014342|9,8,7
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr11|47634671|47639051|-|4|circRNA|MTCH2|NM_014342|5,4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr11|47663025|47667696|-|3|circRNA|AGBL2|ENST00000528609.5|8,7,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr11|47666955|47699553|-|10|circRNA|AGBL2|ENST00000525123.5|17,16,15,14,13,12,11,10,9,8
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr11|47719928|47723316|-|2|circRNA|FNBP4|ENST00000263773.9|16,15
Myeloid Cells
N/A
Not differentially expressed
HT29
Not differentially expressed
Not supported
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