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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr11|9428539|9431003|+|4|circRNA|IPO7|ENST00000379719.7|13,14,15,16 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr11|9429673|9431003|+|2|circRNA|IPO7|ENST00000379719.7|15,16 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr11|9440454|9442197|+|2|circRNA|IPO7|ENST00000379719.7|23,24 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr11|94445809|94447438|-|2|circRNA|MRE11A|ENST00000323929.7|16,15 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr11|94485923|94490965|-|2|circRNA|MRE11A|ENST00000323929.7|4,3 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29 | Not differentially expressed | Not cell-type specific |
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