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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr12|1027747|1028572|+|1|circRNA|ERC1|ENST00000543086.7|2
Not cell-type specific
N/A
Not differentially expressed
HCT116,HT29,LoVo,SW480,SW620
Not differentially expressed
Not cell-type specific
chr12|102851686|102852950|-|2|circRNA|PAH|ENST00000553106.5|8,7
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|102866595|102894918|-|3|circRNA|PAH|ENST00000553106.5|5,4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|103727266|103737780|+|7|circRNA|STAB2|ENST00000388887.6|47,48,49,50,51,52,53
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|103733005|103737780|+|3|circRNA|STAB2|ENST00000388887.6|51,52,53
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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