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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr12|14434336|14438267|+|3|circRNA|ATF7IP|ENST00000261168.8|3,4,5
Not cell-type specific
N/A
Not differentially expressed
SW480
Not differentially expressed
Not cell-type specific
chr12|14446987|14457295|+|3|circRNA|ATF7IP|NM_001286515|6,7,8
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|14457206|14461133|+|2|circRNA|ATF7IP|NM_001286515|8,9
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|14665858|14672314|+|2|circRNA|RP11-174G6.1|ENST00000501178.2|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr12|14669721|14676971|-|4|circRNA|GUCY2C|ENST00000261170.4|10,9,8,7
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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