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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr13|77251150|77264002|-|7|circRNA|MYCBP2|ENST00000544440.6|15,14,13,12,11,10,9 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
chr13|77719531|77753358|+|4|circRNA|SLAIN1|ENST00000418532.5|2,3,4,5 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
chr13|77744282|77753358|+|3|circRNA|SLAIN1|ENST00000418532.5|3,4,5 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr13|77918090|77918624|-|1|circRNA|EDNRB|ENST00000377211.8|2 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr13|78635109|78644997|-|4|circRNA|RNF219|NM_024546|5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
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