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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr13|75796635|75819535|+|8|circRNA|LMO7|ENST00000357063.7|7,8,9,10,11,12,13,14
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr13|75840110|75840360|+|1|ciRNA|LMO7|ENST00000357063.7|22
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr13|77015408|77021861|-|3|circRNA|FBXL3|ENST00000355619.9|4,3,2
Not cell-type specific
N/A
Not differentially expressed
HT29,LoVo,SW480,SW620
Not differentially expressed
Not cell-type specific
chr13|77064614|77067864|-|3|circRNA|MYCBP2|ENST00000544440.6|73,72,71
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr13|77082006|77083031|-|1|ciRNA|MYCBP2|ENST00000544440.6|63
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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