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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr14|92010985|92011795|-|2|circRNA|TRIP11|ENST00000267622.8|9,8 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr14|92014214|92033253|-|6|circRNA|TRIP11|ENST00000267622.8|7,6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr14|92070934|92082466|-|3|circRNA|ATXN3|ENST00000558190.5|10,9,8 | Not cell-type specific | N/A | Not differentially expressed | SW620 | Not differentially expressed | Not cell-type specific |
chr14|92070934|92096134|-|8|circRNA|ATXN3|ENST00000554592.5|10,9,8,7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr14|92709671|92714451|-|6|circRNA|LGMN|ENST00000555699.5|11,10,9,8,7,6 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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