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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr15|40853123|40854689|+|6|circRNA|SPINT1|ENST00000562057.5|3,4,5,6,7,8 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|40982861|40984352|-|3|circRNA|INO80|ENST00000361937.7|35,34,33 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|40997528|41045075|-|6|circRNA|INO80|ENST00000361937.7|29,28,27,26,25,24 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|41020899|41027736|-|2|circRNA|INO80|ENST00000361937.7|26,25 | Not cell-type specific | N/A | Not differentially expressed | HT29,SW620 | Not differentially expressed | Not cell-type specific |
chr15|41055246|41079904|-|10|circRNA|INO80|ENST00000361937.7|18,17,16,15,14,13,12,11,10,9 | Not cell-type specific | N/A | Not differentially expressed | SW620 | Not differentially expressed | Not cell-type specific |
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