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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr15|57451499|57518497|+|6|circRNA|CGNL1|ENST00000281282.5|5,6,7,8,9,10
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr15|57461679|57461892|+|1|circRNA|CGNL1|ENST00000281282.5|8
Not cell-type specific
N/A
Not differentially expressed
LoVo
Not differentially expressed
Not cell-type specific
chr15|57992704|58014281|-|6|circRNA|ALDH1A2|ENST00000537372.5|8,7,6,5,4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr15|58107318|58138572|-|2|circRNA|ALDH1A2|ENST00000559297.5|3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr15|58166672|58179345|+|4|circRNA|AQP9|ENST00000558772.5|2,3,4,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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