top of page
CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr15|65463760|65481615|-|7|circRNA|DPP8|ENST00000341861.9|15,14,13,12,11,10,9 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|65466677|65480399|-|5|circRNA|DPP8|ENST00000341861.9|14,13,12,11,10 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|65485098|65512564|-|7|circRNA|DPP8|ENST00000341861.9|8,7,6,5,4,3,2 | Myeloid Cells | N/A | Not differentially expressed | HCT116,SW620 | Not differentially expressed | Not supported |
chr15|65487689|65500779|-|4|circRNA|DPP8|ENST00000341861.9|7,6,5,4 | Not cell-type specific | N/A | Not differentially expressed | SW620 | Not differentially expressed | Not cell-type specific |
chr15|65507242|65512564|-|2|circRNA|DPP8|ENST00000341861.9|3,2 | Myeloid Cells | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not supported |
Page 1 of 1
bottom of page