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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr15|71875790|71888116|-|6|circRNA|MYO9A|ENST00000356056.9|32,31,30,29,28,27 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr15|71916369|71938927|-|4|circRNA|MYO9A|ENST00000356056.9|19,18,17,16 | Myeloid Cells | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not supported |
chr15|71933669|71978292|-|7|circRNA|MYO9A|ENST00000356056.9|18,17,16,15,14,13,12 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|71935340|71938927|-|2|circRNA|MYO9A|ENST00000356056.9|17,16 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|71991102|71994585|-|2|circRNA|MYO9A|ENST00000356056.9|11,10 | Myeloid Cells | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not supported |
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