top of page
CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr15|65729071|65756472|-|9|circRNA|DENND4A|ENST00000443035.7|11,10,9,8,7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr15|65729071|65761438|-|10|circRNA|DENND4A|ENST00000443035.7|11,10,9,8,7,6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
chr15|65729533|65756472|-|8|circRNA|DENND4A|ENST00000443035.7|10,9,8,7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|65737706|65756472|-|5|circRNA|DENND4A|ENST00000443035.7|7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr15|65752378|65756472|-|2|circRNA|DENND4A|ENST00000443035.7|4,3 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
Page 1 of 1
bottom of page