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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr9|122855183|122859102|-|4|circRNA|RC3H2|ENST00000373670.5|14,13,12,11 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo | Not differentially expressed | Not cell-type specific |
chr9|122865348|122883379|-|6|circRNA|RC3H2|ENST00000373670.5|9,8,7,6,5,4 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr9|122877470|122883379|-|5|circRNA|RC3H2|ENST00000373670.5|8,7,6,5,4 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr9|122877470|122897576|-|8|circRNA|RC3H2|ENST00000498479.5|9,8,7,6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr9|122883203|122897576|-|4|circRNA|RC3H2|ENST00000498479.5|5,4,3,2 | Myeloid Cells | N/A | Not differentially expressed | SW620 | Not differentially expressed | Not supported |
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