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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr17|54938923|54947312|+|2|circRNA|TOM1L1|ENST00000575882.5|11,12 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr17|54947260|54950126|+|3|circRNA|TOM1L1|ENST00000575882.5|12,13,14 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr17|55031167|55047154|+|4|circRNA|STXBP4|NM_178509|9,10,11,12 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr17|55072899|55081183|+|4|circRNA|STXBP4|NM_178509|13,14,15,16 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr17|55401468|55403868|-|2|circRNA|MMD|NM_012329|6,5 | Not cell-type specific | N/A | Not differentially expressed | HT29,SW620 | Not differentially expressed | Not cell-type specific |
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