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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr18|68836748|68846421|+|3|circRNA|CCDC102B|NM_001093729|4,5,6
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
chr18|68838705|68874785|+|3|circRNA|CCDC102B|NM_001093729|5,6,7
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
chr18|693881|706578|-|4|circRNA|ENOSF1|NM_202758|5,4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr18|697239|706578|-|2|circRNA|ENOSF1|NM_202758|3,2
Not cell-type specific
N/A
Not differentially expressed
HT29,SW480
Not differentially expressed
Not cell-type specific
chr18|69867356|69896045|-|3|circRNA|CD226|ENST00000280200.8|6,5,4
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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