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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr19|32619259|32622619|-|3|circRNA|ANKRD27|NM_032139|20,19,18 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr19|32864095|32864776|-|2|circRNA|SLC7A9|ENST00000590341.5|4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr19|32899856|32901412|-|2|circRNA|CEP89|ENST00000305768.9|16,15 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,SW480 | Not differentially expressed | Not cell-type specific |
chr19|32899856|32918339|-|4|circRNA|CEP89|ENST00000305768.9|16,15,14,13 | Myeloid Cells | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not supported |
chr19|32901244|32915517|-|2|circRNA|CEP89|ENST00000305768.9|15,14 | Myeloid Cells | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not supported |
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