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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr2|159170523|159187024|+|7|circRNA|TANC1|NM_001145909|10,11,12,13,14,15,16 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|159248371|159279945|-|8|circRNA|WDSUB1|NM_152528|10,9,8,7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|159373044|159389485|-|7|circRNA|BAZ2B|ENST00000392782.5|26,25,24,23,22,21,20 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
chr2|159448241|159453801|-|2|circRNA|BAZ2B|ENST00000392782.5|5,4 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|159729008|159743253|+|2|circRNA|MARCH7|ENST00000539065.5|2,3 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo | Not differentially expressed | Not cell-type specific |
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