top of page

TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

​

​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

​

*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr2|210637701|210656632|+|9|circRNA|CPS1|NM_001122633|23,24,25,26,27,28,29,30,31
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr2|210637701|210668284|+|13|circRNA|CPS1|NM_001122633|23,24,25,26,27,28,29,30,31,32,33,34,35
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr2|210639995|210648057|+|3|circRNA|CPS1|NM_001122633|25,26,27
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr2|210674901|210677136|+|3|circRNA|CPS1|NM_001122633|36,37,38
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr2|213021992|213148644|-|5|circRNA|IKZF2|NM_016260|6,5,4,3,2
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
Page 1 of 1

Follow Us:

  • Twitter Clean
bottom of page