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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr2|229768615|229785855|-|8|circRNA|TRIP12|NM_001284215|39,38,37,36,35,34,33,32 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|229774096|229788940|-|7|circRNA|TRIP12|NM_001284215|36,35,34,33,32,31,30 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|229802251|229807864|-|5|circRNA|TRIP12|NM_001284215|19,18,17,16,15 | Myeloid Cells | N/A | Not differentially expressed | LoVo,SW620 | Not differentially expressed | Not supported |
chr2|229818363|229830839|-|3|circRNA|TRIP12|NM_001284215|7,6,5 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|229836847|229880128|-|5|circRNA|TRIP12|NM_001284214|6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
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