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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr2|85013935|85028056|+|2|circRNA|KCMF1|ENST00000456682.1|2,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr2|85027888|85049648|+|5|circRNA|KCMF1|ENST00000409785.8|2,3,4,5,6 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr2|85043563|85049648|+|3|circRNA|KCMF1|ENST00000409785.8|4,5,6 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr2|85368685|85369830|+|2|circRNA|ELMOD3|ENST00000409331.6|6,7 | Not cell-type specific | N/A | Not differentially expressed | HT29,SW480 | Not differentially expressed | Not cell-type specific |
chr2|85368685|85371209|+|3|circRNA|ELMOD3|ENST00000409331.6|6,7,8 | Stromal cells | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not supported |
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