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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr20|25634048|25634827|+|2|circRNA|ZNF337-AS1|NR_126466|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr20|25634048|25645648|+|3|circRNA|ZNF337-AS1|ENST00000428254.5|3,4,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr20|25835983|25837076|-|3|circRNA|FAM182B|TCONS_l2_00016541|5,4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr20|28581918|28591519|-|6|circRNA|FRG1CP|NR_132315|8,7,6,5,4,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr20|2964271|2965202|+|2|circRNA|PTPRA|ENST00000380393.7|8,9
Not cell-type specific
N/A
Not differentially expressed
HCT116,HT29,LoVo,SW480,SW620
Not differentially expressed
Not cell-type specific
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