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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr21|33414887|33432871|+|5|circRNA|IFNGR2|ENST00000290219.10|2,3,4,5,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr21|33432176|33432871|+|2|circRNA|IFNGR2|ENST00000290219.10|5,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr21|33455726|33468926|-|5|circRNA|TMEM50B|ENST00000420455.5|6,5,4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr21|33532344|33539356|-|4|circRNA|GART|ENST00000381815.8|5,4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr21|33534578|33539356|-|3|circRNA|GART|ENST00000381815.8|4,3,2
Not cell-type specific
N/A
Not differentially expressed
LoVo,SW480,SW620
Not differentially expressed
Not cell-type specific
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