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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr22|24338385|24347176|+|2|circRNA|SPECC1L|ENST00000437398.5|9,10
Not cell-type specific
N/A
Not differentially expressed
HCT116,HT29,SW480
Not differentially expressed
Not cell-type specific
chr22|24460452|24475153|-|3|circRNA|ADORA2A-AS1|ENST00000427813.6|4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr22|24471767|24475153|-|2|circRNA|ADORA2A-AS1|ENST00000326341.8|3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr22|24500106|24502213|+|2|circRNA|UPB1|ENST00000326010.9|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr22|25181698|25185119|+|2|circRNA|KIAA1671|ENST00000406486.8|11,12
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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