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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr22|41172498|41173784|+|2|circRNA|EP300|ENST00000263253.7|28,29 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr22|41264663|41268156|-|2|circRNA|RANGAP1|NM_001278651|6,5 | Myeloid Cells | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not supported |
chr22|41268096|41281082|-|3|circRNA|RANGAP1|NM_001278651|5,4,3 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo | Not differentially expressed | Not cell-type specific |
chr22|41274599|41281082|-|2|circRNA|RANGAP1|NM_001278651|4,3 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo | Not differentially expressed | Not cell-type specific |
chr22|41320654|41327364|+|4|circRNA|ZC3H7B|NM_017590|2,3,4,5 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
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