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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr9|6595013|6606669|-|5|circRNA|GLDC|ENST00000321612.6|9,8,7,6,5
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|6602108|6605278|-|3|circRNA|GLDC|ENST00000321612.6|8,7,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|67188784|67201219|+|5|circRNA|CNTNAP3P2|NR_111893|5,6,7,8,9
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|68248805|68260996|+|4|circRNA|CBWD3|ENST00000377344.6|4,5,6,7
Not cell-type specific
N/A
Not differentially expressed
LoVo
Not differentially expressed
Not cell-type specific
chr9|68378198|68465208|+|6|circRNA|PGM5|ENST00000396392.5|2,3,4,5,6,7
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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