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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr3|132704197|132705814|-|2|circRNA|NPHP3-ACAD11|NR_037804|9,8
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr3|132713125|132716909|-|3|circRNA|NPHP3-ACAD11|NR_037804|6,5,4
Not cell-type specific
N/A
Not differentially expressed
HCT116,SW620
Not differentially expressed
Not cell-type specific
chr3|133746483|133748411|+|1|ciRNA|TF|ENST00000402696.7|1
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr3|133756830|133759329|+|3|circRNA|TF|ENST00000402696.7|7,8,9
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr3|133756830|133764275|+|4|circRNA|TF|ENST00000402696.7|7,8,9,10
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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