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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr3|43574808|43580472|-|3|circRNA|ANO10|ENST00000292246.7|7,6,5 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr3|44829970|44840456|+|4|circRNA|KIF15|NM_020242|25,26,27,28 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr3|44945167|44959460|-|2|circRNA|ZDHHC3|NM_001135179|3,2 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW480 | Not differentially expressed | Not cell-type specific |
chr3|45703437|45719601|+|7|circRNA|SACM1L|ENST00000455997.5|2,3,4,5,6,7,8 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
chr3|45955248|45962392|-|4|circRNA|FYCO1|ENST00000535325.5|14,13,12,11 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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