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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr9|86322324|86338949|-|7|circRNA|ZCCHC6|ENST00000277141.10|15,14,13,12,11,10,9
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|8633316|8636844|-|2|circRNA|PTPRD|NM_001040712|3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|88426381|88448989|+|2|circRNA|SPIN1|NM_006717|2,3
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|92045998|92068098|-|7|circRNA|SPTLC1|NM_001281303|12,11,10,9,8,7,6
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr9|92055404|92080963|-|5|circRNA|SPTLC1|NM_001281303|8,7,6,5,4
Myeloid Cells
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not supported
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