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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr5|109767534|109823837|+|11|circRNA|MAN2A1|ENST00000261483.4|6,7,8,9,10,11,12,13,14,15,16 | Not cell-type specific | N/A | Not differentially expressed | HCT116 | Not differentially expressed | Not cell-type specific |
chr5|109781395|109789527|+|4|circRNA|MAN2A1|ENST00000261483.4|9,10,11,12 | Not cell-type specific | N/A | Not differentially expressed | HT29,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr5|109817272|109823837|+|4|circRNA|MAN2A1|ENST00000261483.4|13,14,15,16 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr5|109842327|109847790|+|3|circRNA|MAN2A1|ENST00000261483.4|17,18,19 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr5|110390415|110424916|-|3|circRNA|TMEM232|ENST00000507188.6|4,3,2 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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