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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr5|116298246|116303683|+|2|circRNA|COMMD10|ENST00000508250.5|3,4
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr5|118928536|118944649|-|3|circRNA|DTWD2|NM_001308081|4,3,2
Not cell-type specific
N/A
Not differentially expressed
HCT116,LoVo,SW480
Not differentially expressed
Not cell-type specific
chr5|119105179|119129423|+|7|circRNA|DMXL1|NM_001290321|4,5,6,7,8,9,10
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr5|119164506|119167864|+|4|circRNA|DMXL1|NM_001290321|20,21,22,23
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr5|119164506|119178244|+|9|circRNA|DMXL1|NM_001290321|20,21,22,23,24,25,26,27,28
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
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