top of page
CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr6|119002898|119024813|-|9|circRNA|FAM184A|ENST00000621231.4|10,9,8,7,6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|119188404|119193892|-|3|circRNA|MAN1A1|NM_005907|11,10,9 | Not cell-type specific | N/A | Not differentially expressed | HCT116 | Not differentially expressed | Not cell-type specific |
chr6|121106022|121131752|-|6|circRNA|TBC1D32|ENST00000398197.6|10,9,8,7,6,5 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29 | Not differentially expressed | Not cell-type specific |
chr6|121106022|121170527|-|10|circRNA|TBC1D32|NR_104452|34,33,32,31,30,29,28,27,26,25 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
chr6|121106022|121242339|-|13|circRNA|TBC1D32|NM_152730|30,29,28,27,26,25,24,23,22,21,20,19,18 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
Page 1 of 1
bottom of page