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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr6|131884930|131886724|+|2|circRNA|ENPP1|ENST00000360971.6|23,24 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|13227815|13230193|+|2|circRNA|PHACTR1|NM_001242648|9,10 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|133980081|133984671|+|5|circRNA|TBPL1|ENST00000613034.4|2,3,4,5,6 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr6|134942408|134943966|-|2|circRNA|ALDH8A1|ENST00000265605.6|3,2 | Not cell-type specific | N/A | Not differentially expressed | HCT116 | Not differentially expressed | Not cell-type specific |
chr6|134978678|134996942|-|9|circRNA|HBS1L|ENST00000367837.9|15,14,13,12,11,10,9,8,7 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
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