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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr6|34821652|34823348|+|3|circRNA|UHRF1BP1|ENST00000452449.6|2,3,4 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|34821652|34836348|+|7|circRNA|UHRF1BP1|ENST00000452449.6|2,3,4,5,6,7,8 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|34834216|34836348|+|4|circRNA|UHRF1BP1|ENST00000452449.6|5,6,7,8 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
chr6|34967238|34970166|+|2|circRNA|ANKS1A|NM_015245|2,3 | Myeloid Cells | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not supported |
chr6|34994301|35060253|+|4|circRNA|ANKS1A|NM_015245|10,11,12,13 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
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